Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892277.1_cds_XP_016447171.1_41956
CDS Infomation

[gene=LOC107772187] [db_xref=GeneID:107772187] [protein=probable protein phosphatase 2C 47] [protein_id=XP_016447171.1] [location=complement(join(31865..32420,33385..33590,33988..34182,35463..35630))] [gbkey=CDS]
Sequence

ATGATGGCTCCAAGCACAAATGTGTTACCATGTAATGGAGAAATGGAAAATATATCAGAA
AATCAAGAGGAATGTGGTCATTCAAGTCACTTAAATATAGGGAAGCCACCAACAGGGATG
CGGCATTGTATCAGCCAAGCTACCTTGGCAGCTACTTCTTCTGCATTGGAACCGACTTCA
CAAATTCTTGCTCTTAAATCTTCATCAAGTGACGATTCAGGATACATTCCCATCTTTCGG
TCAGGAAGCTATTCTGAGATTGGACCAAAACCATACATGGAAGACGAGCATATCTGTATC
GATGACCTGCGGGAACACATTGGCGCATCCGAGGGGCTTCTTTCTCCGGGGGCATTTTAT
GGGGTGTTTGATGGTCATGGTGGTGTTGATGCTGCGTCATTCACCCAAAAGAATCTCCTA
GACTTCATTGTAGAGGATTCACATTTTCCATCGATGGTCAAAAGAGCTATCAGGAATGCT
TTTAAGAAAGCTGATAATGCACTTGCTGATACTAAATCACTTGATAATACCTCTGGAACA
ACTGCTCTGACTGCACTTATGTTAGGACGGACCATGGTTATTGCGAATGCTGGGGACTCT
CGAGCTGTTCTAGGAAAACGAGGAAGAGCAATAGAATTATCAAAGGACCACAAACCAAAC
ACTAATTCTGAAAGATTACGGATCGAGAAACTAGGGGGAGTCATTTACGATGGTTATCTT
AATGGCCAACTCTCGGTTGCACGAGCTCTTGGTGATTGGCATATAAAGGGTTCCAAAGGT
ACAAAGGGCCCCTTAAGCTCGGAGCCAGAGTTGGAAAAGGTGATCCTATCCGAAGAGGAC
GAGTTCTTGATCATGGGCTGTGATGGCTTATGGGATGTCATGAGTAGCCAGTACGCTGTA
ACAATCGTGAGGAAGGAACTCATGCTGCATAATGATCCCGAGAGGTGCTCGAGGGAGCTT
GTCAGGGAGGCACTAAAACGTAACACGTGTGATAATCTAACCGTACTTGTAGTCTGCTTC
TCTCGCGATCCACCCACTCGAATTGAAATACCAAGAACTGAGAGGAGGAGGAGCATATCA
GCTGAAGGATTGGATCTTATAAAGGGTGTCTTGAGTGACATATAA

Peptide Sequence

PEP ID

XP_016447171.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 47 [Nicotiana tabacum]
Sequence

MMAPSTNVLPCNGEMENISENQEECGHSSHLNIGKPPTGMRHCISQATLAATSSALEPTS
QILALKSSSSDDSGYIPIFRSGSYSEIGPKPYMEDEHICIDDLREHIGASEGLLSPGAFY
GVFDGHGGVDAASFTQKNLLDFIVEDSHFPSMVKRAIRNAFKKADNALADTKSLDNTSGT
TALTALMLGRTMVIANAGDSRAVLGKRGRAIELSKDHKPNTNSERLRIEKLGGVIYDGYL
NGQLSVARALGDWHIKGSKGTKGPLSSEPELEKVILSEEDEFLIMGCDGLWDVMSSQYAV
TIVRKELMLHNDPERCSRELVREALKRNTCDNLTVLVVCFSRDPPTRIEIPRTERRRSIS
AEGLDLIKGVLSDI

Transcript Sequence

Gene sequence data has not been registered.